11 Top Ecotourism Sites in the Philippines: Best Destinations & Activities

11 Top Ecotourism Sites in the Philippines: Best Destinations & Activities

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Masungi Georserve and Danjugan IslandPhotos by Masungi Georserve (left) and Danjugan Island (right)

The Philippines is home to some of the most vibrant ecotourism destinations in the world, from lush forests to winding rivers and pristine seas teeming with wildlife. They are worth visiting yet equally worth protecting. Eco tours in the Philippines allow you to enjoy their beauty responsibly. This article lists the best ecotourism sites in the Philippines that deserve a spot on your itinerary.

Explore the protected landscape of the Puerto Princesa Underground River or hike the majestic slopes of Mt. Apo. Experience the sustainable whale shark interaction in Sorsogon Province, a model for responsible marine tourism. For divers, nothing compares to Tubbataha Reef, one of the most spectacular UNESCO World Heritage Sites in the Philippines. And the list goes on!

To preserve the country’s natural treasures, it’s essential to travel mindfully and support the communities that protect them. By visiting sites that practice sustainable tourism in the Philippines, you help conserve ecosystems and ensure local traditions continue to thrive. These eco-conscious trips let you enjoy breathtaking sights while leaving a positive impact on both nature and people.

Ready to start your eco-adventure? Keep reading to discover 11 incredible ecotourism sites in the Philippines and the best activities you can enjoy at each destination.

Key Takeaways

  • The Philippines is blessed with vibrant ecosystems and stunning landscapes that deserve to be explored—but also protected through sustainable tourism practices. Eco-friendly and sustainable tours give you the chance to enjoy these natural gems responsibly while supporting local communities and helping preserve them for future generations.

  • Here are the top ecotourism sites & activities in the Philippines you can add to your travel list:

    • Puerto Princesa Underground River (Palawan Island): Cruise through its limestone waterways and marvel at one of the New 7 Wonders of Nature.

    • Donsol Whale Shark Interaction (Sorsogon Province): Swim responsibly with gentle whale sharks while supporting local conservation efforts.

    • Masungi Georeserve (Rizal Province): Hike and explore eco-trails while experiencing conservation in action just outside Manila City.

    • Tubbataha Reef (Palawan Island): Dive into one of the world’s best marine sanctuaries, home to vibrant corals and diverse sea life.

    • Iwahig River (Puerto Princesa City): Enjoy a magical firefly-watching experience under starlit skies.

    • Mount Apo (Mindanao Island): Trek the country’s highest peak and immerse yourself in its diverse wildlife and forests.

    • Batanes Islands: Wander through breathtaking landscapes and connect with the Ivatan community’s rich traditions.

    • Batad Rice Terraces (Banaue Town): Explore these UNESCO-listed terraces, a testament to ancient engineering and harmony with nature.

    • Bojo River (Cebu Island): Take a relaxing eco-river cruise guided by locals who share their knowledge of mangroves and marine life.

    • Cambuhat River (Bohol Island): Experience a community-led tour that highlights oyster farming and river conservation.

  • You can book activities and tours in the Philippines to make hopping from one site to the next more convenient. Trusted agencies like Guide to the Philippines are your go-to for expert local guidance and fully arranged details, making your sustainable adventures completely hassle-free.

A traveler marvels at the lush forest and karst formations in Masungi Georeserve.

What is Ecotourism?

Ecotourism is a form of traveling that focuses on exploring natural destinations while caring for the environment and the people who call these places home. Instead of just passing through, you travel in a way that protects ecosystems and supports the communities that depend on them.

Ecotourism in the Philippines offers a more mindful and rewarding way to discover incredible landscapes and cultural treasures. To gain a deeper appreciation of the country’s natural wonders, you check out these top ecotourism sites in the Philippines that will inspire you to travel more sustainably while experiencing the best of its landscapes and traditions:

Puerto Princesa Underground River (Palawan Island)

Puerto Princesa Underground RiverThe Palawan Underground River is one of the top ecotourism destinations in the world, teeming with a rich variety of birds, fish, and other wildlife. Nestled in the lush forests of Puerto Princesa City on Palawan Island, this natural gem is a UNESCO World Heritage Site and one of the New 7 Wonders of Nature. It’s a must-visit among the many beautiful attractions in Puerto Princesa City.

Recognized as a Ramsar Wetland of International Importance, the Palawan Underground River allows visitors to experience nature responsibly, as daily visitor numbers are limited and strict guidelines are followed. By joining Palawan Underground River tours, you support conservation efforts and help sustain the local community that manages this natural treasure.

11 Top Ecotourism Sites in the Philippines: Best Destinations & ActivitiesDuring a Puerto Princesa Underground River tour, you’ll sail along a river that winds through one of the world’s most impressive cave systems. Marvel at towering limestone formations as you glide through the cave. Along the riverbanks, keep an eye out for endemic bird species, including the striking Palawan hornbill, and watch as monkeys and reptiles thrive in the surrounding forest.

As a protected landscape, the number of daily visitors is limited, so it’s highly recommended to book your tours in Puerto Princesa City well in advance. Planning ahead ensures you can fully enjoy this natural wonder while traveling responsibly and supporting local preservation programs.



Donsol Whale Shark Interaction (Sorsogon Province)

A whaleshark swimming with Mayon Volcano in the background above water.

On the southern coast of Luzon Island in Bicol Region, Sorsogon Province is known for its stunning beaches, lush landscapes, and unforgettable wildlife encounters. Among the best things to do in Sorsogon Province is joining a sustainable whale shark tour in Donsol town, where you can swim alongside the gentle giants of the sea in a responsible way.

While the province boasts incredible Bicol Region attractions like Mount Bulusan inside Bulusan Volcano Natural Park and the pinkish sand of Subic Beach in Matnog town, Donsol town stands out as one of the best places to swim with whale sharks in the Philippines. Its commitment to ethical tourism makes it a must-visit destination for nature lovers.

A gentle whale shark swimming in the waters of the Philippines.You local guide will remind you of three important rules: never touch the whale sharks, stay at least three meters from their tails, and avoid using flash photography. By following these simple guidelines, you ensure a safe and truly memorable encounter while helping protect their habitat. These sustainable tours in Sorsogon Province help preserve this incredible marine experience.

This eco-conscious approach has made Donsol town one of the must-visit spots in Sorsogon Province for travelers who want an experience that gives back to the environment and community. To get here, book one of the many daily flights to Legazpi City in Bicol Region, then take a scenic two-hour drive to Donsol town for your adventure.

Masungi Georeserve (Rizal Province)

Trekking in Masungi GeoreservePhoto by Masungi Georeserve

The Masungi Georeserve is a stunning geopark in Rizal Province, a favorite area for hiking spots near Manila City. Known for its dramatic limestone peaks and lush rainforests, this eco-park is home to around 400 animal species. One of its most unique residents is a tiny subspecies of micro snail, Hypselostoma latispira masungiensis, found only within the georeserve.

One of the best attractions in Rizal Province, the Masungi Georeserve offers immersive experiences that let you truly connect with nature, whether through a trek or a relaxing garden picnic. The Discovery Trail is a 3–4 hour hike across the conservation area and its rugged karst terrain, while the Legacy Trail lasts 5–6 hours and includes tree planting—a rewarding way to give back to nature.

Visitors enjoying one of the thrilling activities during a hike through Masungi Georeserve.

Age limits are in place to keep everyone safe and comfortable: travelers 13 and older can enjoy the Discovery Trail, while those 10 and up can experience the Legacy Trail. The Garden Picnic is perfect for visitors of all ages who simply want to relax and soak in the beauty of nature. Each experience includes a meal, but you’ll need to arrange your own transportation to and from the georeserve.

For a stress-free journey, you can rent a car with a driver to take you directly to the georeserve. While in the area, you can explore other tours in Rizal Province that provide local guidance and all the essentials for a smooth and memorable hiking adventures in the Philippines.

Tubbataha Reefs Natural Park (Sulu Sea, Palawan Island)

Tubbataha Reefs Natural Park Diving

The Tubbataha Reefs Natural Park lies in the heart of the Sulu Sea, about 50 km southeast of Palawan Island, one of the top attractions in Palawan Island Province. This remote marine sanctuary spans over 97,000 hectares and is home to around 360 species of coral and nearly 700 kinds of fish, making it a breathtaking underwater paradise.

Renowned for its incredible marine biodiversity, Tubbataha Reef offers some of the best diving adventures in the Philippines. As a UNESCO World Heritage Site, access is limited to protect the delicate ecosystem, so only a small number of visitors are allowed each season. Certified scuba divers aged 10 and up can join liveaboard trips, the main way to explore this pristine reef safely.

While in the region, consider joining guided Palawan Island tours to explore nearby highlights and make the most of your visit. You can also explore prearranged Palawan Island vacation packages, which take care of all the details for you. With local expertise and logistics handled, you can focus on soaking in one of the Philippines’ most spectacular destinations.

Danjugan Island Sanctuary (Negros Occidental Province)

Danjugan IslandPhoto by Danjugan Island Sanctuary

Danjugan Island, off the coast of Negros Occidentaland Province is a protected wildlife and marine sanctuary. The island features seven thriving ecosystems that provide safe havens for fish, birds, corals, butterflies, bats, and nesting sea turtles. You can explore the sanctuary on a day trip or stay overnight to fully immerse yourself in its natural beauty.

All overnight stays include guided tours with gear for snorkeling, skin diving, kayaking, trekking, and birdwatching. The island is managed by The Philippine Reef and Rainforest Conservation Inc., which also hosts educational youth and adult camps—lasting five and three days respectively—filled with hands-on activities about wildlife and conservation.

To get to Danjugan Island, you’ll need to fly to Bacolod City. Several flights to Bacolod City are available from major airports around the Philippines. If you plan to extend your trip, be sure to book tours around Bacolod City to explore nearby spots. This way, you can enjoy Danjugan Island and discover more of Negros Occidental Province, including the top tourist spots in Bacolod City.

Firefly Watching Tours (Bohol Island & Puerto Princesa City)

11 Top Ecotourism Sites in the Philippines: Best Destinations & ActivitiesThere’s something magical about watching fireflies light up the night. These tiny glowing creatures turn riverside mangroves into living lanterns, offering one of the most enchanting sights you can experience in the Philippines. Firefly watching tours let you slow down, connect with nature, and witness a natural spectacle that feels straight out of a fairytale.
Bohol Island is home to lush mangrove forests where you can experience this wonder after dark. The best way to see it is by joining the unforgettable firefly watching tour on Bohol Island, where you’ll cruise along the scenic Abatan River. Proceeds help protect the mangroves, support local ecotourism projects, and fund scholarships, making this a meaningful activity for nature lovers.

11 Top Ecotourism Sites in the Philippines: Best Destinations & ActivitiesYou can also witness this magical scene on Palawan Island by joining the Iwahig River firefly watching tour in Puerto Princesa City. As you glide along the calm waters, the mangrove trees sparkle with thousands of fireflies from the Pteroptyx species, creating a breathtaking glow under the night sky. On some evenings, you can witness bioluminescent planktons twinkling in the water.

Watching fireflies dance above while the river shimmers below is one of the most memorable eco-experiences and among the top things to do on Bohol Island and in Puerto Princesa City, all while supporting local community initiatives. Firefly watching river tours offer a unique way to experience nature’s glowing lights and create memories you’ll cherish forever.



Las Piñas Parañaque Wetland Park Eco Tour (Metro Manila)

Las Piñas Parañaque Wetland ParkPhoto by Las Piñas Parañaque Wetland Park

If you’re looking for a refreshing escape from the busy streets of Manila City, head to the Las Piñas–Parañaque Wetland Park. Sitting along the coasts of the capital region, this hidden gem is one of the best nature trips near Manila City. The park is made up of two islands with mangroves, lagoons, ponds, and mixed beach forests, making it a peaceful spot to reconnect with nature.

As a protected area, the park serves as a seasonal sanctuary for migratory birds. From August to April, you might spot up to 41 different species flying in from Japan and Siberia. Keep your eyes peeled for the Philippine duck, an endemic bird that calls the park home year-round.

Kingfisher in Las Pinas Water Park

Visiting the Las Piñas–Parañaque Wetland Park is one of the best things to do around Manila City if you want to swap the urban rush for a dose of nature. It gives you a rare chance to enjoy birdwatching, connect with nature, and see a side of Metro Manila that many travelers often miss.

Joining a tour here is free, but you’ll need to email denrncrlpppchea@gmail.com to request permission. Smaller groups of up to 7 people are easier to arrange, while groups of 8 or more take longer to process. It’s a great way to experience nature in the city while supporting the conservation of this protected park.



Mount Apo (Davao Region)

Mt. Apo, Davao

Rising 2,956 meters above sea level, Mount Apo in the Davao Region is the highest peak in the country and one of the best hikes in the Philippines. Taking on this climb is also among the top things to do around Davao City, as the hike challenges you with diverse landscapes and rewards you with stunning views and unforgettable experiences.

As you make your way to the peak, you’ll pass through mossy swamps, rocky trails, and lush forests where wild deer roam. At the summit, you’ll be greeted with breathtaking views of surrounding mountain ranges and Lake Venado, one of the most beautiful lakes in the country. The best time to hike is during the dry season, from December to May, when the trails are most manageable.

A scenic view of Mt. Apo in Davao Region.With several daily flights to Davao City from airports across the Philippines, reaching Mount Apo is easy. From the city, you can book a Mt. Apo hiking tour package that takes care of everything—from transportation and climb permits to camping gear, meals, and the support of trained guides. This way, you can focus on the adventure and enjoy one of the best hikes in the Philippines.

After your hike, you can explore more tours around Davao City, from visiting local markets and tasting durian to enjoying nearby beaches and cultural sites. For adventure seekers and nature lovers, conquering Mount Apo is one of those experiences you’ll treasure forever.



Batanes Island Province

Vayang Rolling Hills in Batanes

Batanes Island, the northernmost part of the Philippines, is an ecotourism zone where untouched landscapes allow plants, trees, and wildlife to thrive. Beyond its natural beauty, the island is also celebrated for its centuries-old stone houses, rich culture, and strong sense of community, with locals known for their warm hospitality and deep respect for tradition and the environment.

When planning your trip, make sure to add Morong Beach to your list of places to visit on Batanes Island. This serene stretch of powdery sand is best known for the stunning Nakabuang Arch, a natural rock formation. For breathtaking views, head to the picturesque Vayang Rolling Hills, where endless greenery meets the sea—best explored when you book tours on Batanes Island.

The scenic shores of Morong Beach on Batanes Island.To get here, you’ll need to book flights to Batanes Island from Manila City or Clark Freeport. Once you arrive, you’ll find a good selection of hotels on Batanes Island. If you want a seamless trip, consider booking a 3-day tour package to Batanes Island, which already includes accommodations and transfers, so you can simply enjoy your vacation.

For a hassle-free adventure, you can also explore the best selection of curated Batanes Island tour packages. These let you experience the best of this stunning province—from rolling hills to hidden beaches—without worrying about logistics, so you can focus on soaking in the scenery and culture.

Batad Rice Terraces (Banaue Town)

Batad Rice Terraces in Banaue, Ifugao

The Batad Rice Terraces in Banaue town are among the most breathtaking landscapes in the Philippines. Carved into the mountainsides by the Ifugao people over 2,000 years ago, these terraces are living testaments to sustainable farming and cultural heritage. Recognized as a UNESCO Heritage Site, they remain one of the top destinations in North Luzon for nature and culture lovers.

When you join one of the Banaue Rice Terraces tours, you’ll see firsthand how the terraces are still used to grow rice much like they were centuries ago. Walking between the stone steps, you’ll feel the incredible connection between the land and the communities who have preserved it for generations.

To make the most of your trip, consider booking the epic 2-Day Batad Town & Banaue Rice Terraces tour package. With everything arranged—from transportation and accommodation to guided walks and local insights—you can focus on soaking in the sweeping views, learning about the traditions of the Ifugao, and capturing stunning photos of one of the most iconic sights in the Philippines.

River Tours (Bohol & Cebu Islands)

11 Top Ecotourism Sites in the Philippines: Best Destinations & ActivitiesPhoto by Aloguinsan Tourism Office

If you’re looking for a peaceful yet meaningful adventure, the ecofriendly river tours on Bohol Island and Cebu Island are must-tries. These community-based experiences let you glide along serene waterways while learning about local culture and efforts to protect the environment. They’re the perfect blend of nature, relaxation, and authentic connection with the locals.

On Cebu Island, don’t miss the Bojo River in Aloguinsan town. Step into a lush world of mangroves and wildlife. The cruise takes you on a 1.4-kilometer journey aboard non-motorized boats, ensuring a calm ride that doesn’t disturb the ecosystem. With daily visitors capped, you get a more intimate experience—a highlight when you book the tour to Bojo River & Hermit Cove on Cebu Island.

The local guides share stories about the river’s wildlife and their community’s conservation efforts. It’s no wonder the Bojo River is considered a model for sustainable tourism and one of the must-do tours on Cebu Island. This scenic cruise in Aloguinsan town is one of the best things to do on Cebu Island for a worthwhile trip that gives back to the community and the environment.

Cambuhat River on Bohol IslandOver on Bohol Island, the Cambuhat River offers an equally enchanting journey. Imagine gliding on a paddleboat through tranquil and mangrove-lined waters. Here, you’ll stop by an aquaculture farm to learn about oyster cultivation and enjoy a fresh seafood feast by the river. You can experience this unique eco-adventure on a private tour to Bohol Island's Cambuhat River and oyster farm.

What makes the Cambuhat River tour unforgettable is its cultural immersion. You’ll visit a riverside community village where artisans weave cloth on traditional looms and craft handmade items like mats and baskets. It’s a heartwarming way to see how locals keep their traditions alive while embracing sustainable living—and you get to be part of their story.



Visit the Best Ecotourism Spots in the Philippines

A limestone peak in Masungi GeoreservePhoto by Masungi Georeserve

The Philippines is filled with natural wonders waiting for you to explore. By joining ecotourism activities in the Philippines, you not only enjoy lush landscapes and pristine beaches but also help preserve them for future generations. Whether it’s the white-sand shores of Palawan Island or the rolling green hills of Batanes Island, you’ll find countless ways to enjoy sustainable travel.

For a seamless adventure, consider booking trip packages to the Philippines that already include accommodations, transportation, and tours. These packages save you time and let you focus on what matters most—immersing yourself in nature. From sightseeing tours to hiking and diving, you’ll discover plenty of ways to embrace the outdoors responsibly.

Every ecofriendly tour gives you more than just stunning views. Whether it’s a conservation-focused river cruise or a cultural village encounter, these experiences connect you with local communities and traditions while supporting sustainable practices. Plan your adventure today and let your travels make a positive impact.

Frequently Asked Questions

Ecotourism in the Philippines opens the door to unforgettable adventures while helping preserve the country’s natural and cultural treasures. To make your trip smoother and more meaningful, here are some key FAQs that will guide you in planning ecotourism spots in the Philippines.

What makes the Philippines a great destination for ecotourism?

The Philippines is home to pristine beaches, lush forests, winding rivers, and vibrant reefs. Beyond the scenery, you’ll find communities on every island, town, and city working hard to preserve these natural treasures. Choosing ecotourism lets you experience these wonders while giving back to the people who protect them.

Which ecotourism sites in the Philippines should I not miss?

You’ll find some truly unforgettable ecotourism sites across the country, each with its own charm and reason to visit.

  • Puerto Princesa Underground River (Palawan Island): Cruise through limestone caves in one of the New 7 Wonders of Nature. It’s a magical way to experience Palawan’s pristine landscape while supporting conservation.

  • Donsol (Sorsogon Province): Swim alongside gentle whale sharks in this quiet town. The interaction here is regulated, making it one of the best models of sustainable marine tourism in the Philippines.

  • Mount Apo (Mindanao Island): Hike the country’s highest peak and soak in panoramic views. This climb not only rewards adventurers but also helps raise awareness about preserving its rich biodiversity.

  • Batad Rice Terraces (Banaue Town): Marvel at ancient hand-carved terraces, a UNESCO World Heritage Site. Visiting supports local communities who have kept this tradition alive for centuries.

  • Cambuhat River (Bohol Island): Glide along a peaceful river while learning about oyster farming. Your visit directly benefits locals who practice sustainable aquaculture.

  • Bojo River (Cebu Island): Paddle through mangrove-lined waterways at this award-winning site recognized globally for sustainability. It’s a perfect mix of natural beauty and community-led tourism.

Each destination not only offers breathtaking experiences but also allows you to give back by traveling responsibly.

Can I explore the ecotourism sites on my own, or do I need to book a tour?

Ecotourism sites in the Philippines require you to join a guided tour since they are protected areas or community-managed destinations. Local guides share fascinating insights about each site, arrange transportation, and make sure you follow conservation rules, so your visit remains sustainable.

Additionally, booking your eco tours in the Philippines in advance is highly recommended to secure your spots, especially for popular activities during peak season.

How can you make sure a tour or destination is truly sustainable?

You can make your trip more sustainable by choosing eco-friendly activities and tours in the Philippines that directly support local communities and protect the environment.

Go for experiences like whale shark watching in Donsol town, where encounters follow strict guidelines—such as no feeding and no touching—to ensure safe and responsible wildlife interactions. You can also enjoy river cruises along Cambuhat River on Bohol Island, where locals highlight oyster farming and conservation efforts.

Look out for ecotourism sites that have earned recognition for sustainability, such as Bojo River on Cebu Island, an award-winning site for community-based tourism, or protected landscapes like the Puerto Princesa Underground River. Tubbataha Reef is another excellent example, where strict entry regulations limit visitors. These places show strong commitments to preserving nature.

To avoid unsustainable tours, steer clear of activities that exploit wildlife, like feeding animals or touching marine life. Watch for red flags such as guides ignoring conservation rules or prioritizing tourist volume over protection. If a tour doesn’t involve the local community, lacks conservation practices, or puts the environment at risk, it’s not true sustainable tourism.

Finally, make sure to book eco tours through accredited channels, such as trusted travel agencies like Guide to the Philippines, to ensure your trip is safe, responsible, and genuinely supports local conservation efforts.

When is the best time to explore ecotourism sites in the Philippines?

Dry season, from November to May, is the most convenient time for outdoor activities like diving, hiking, or river tours. However, some spots, like Batad Rice Terraces in Banaue town or Batanes Islands, stay enchanting year-round. Just pack for the weather and embrace the adventure—it’s part of the fun!

Are eco tours in the Philippines suitable for children?

Yes, many eco tours in the Philippines are family-friendly and make for an exciting adventure for children. Activities like firefly watching along the Iwahig River in Puerto Princesa City or gentle river cruises in places like Bojo River on Cebu Island are safe and enjoyable. Local guides also tailor the experience so kids can learn about nature while having fun.

Are eco tours in the Philippines senior- and PWD-friendly?

Absolutely—there are plenty of eco tours that seniors and persons with disabilities can enjoy. Options like river cruises, heritage walks in towns, or cultural immersion trips are designed to be accessible and relaxed.

When you book with Guide to the Philippines, you can further customize transportation and itineraries for a smooth, enjoyable trip. For special requests, just use the chat widget on the website or email info@guidetothephilippines.ph.

Is ecotourism only about nature activities?

Not at all! Ecotourism also celebrates culture and traditions. In Batanes Islands, for example, you’ll discover stone houses and age-old customs preserved by the Ivatan people. In towns like Banaue, you’ll see how rice terraces aren’t just scenic but also part of a sustainable farming lifestyle passed down for centuries.

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